STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_6373Putative exosome complex exonuclease rrp40 protein. (252 aa)    
Predicted Functional Partners:
UCREL1_10802
Putative 3 exoribonuclease family protein.
  
 0.999
UCREL1_7935
Putative exosome complex subunit rrp46 protein.
  
 0.999
UCREL1_10735
Putative exosome complex exonuclease rrp43 protein.
   
 0.999
UCREL1_9420
Putative 3-5 exoribonuclease csl4 protein.
   
 0.999
UCREL1_1919
Putative exosome complex exonuclease rrp4 protein.
   
 0.999
UCREL1_9779
Putative exosome complex exonuclease rrp41 protein.
  
 0.998
UCREL1_9907
Putative 3 exoribonuclease protein.
  
 0.998
UCREL1_10698
Putative atp-dependent rna helicase dob1 protein.
   
 0.992
UCREL1_5478
Putative sas10 utp3 c1d protein.
   
 0.990
UCREL1_9439
Putative mitotic control protein dis3 protein; Belongs to the RNR ribonuclease family.
   
 0.986
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.