STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_2780F-box domain-containing protein. (452 aa)    
Predicted Functional Partners:
UCREL1_4086
Putative mitotic spindle checkpoint component mad2 protein.
   
 0.702
UCREL1_8459
Putative transcription initiation factor tfiid subunit 1 protein.
   
 0.686
UCREL1_11109
Putative taf6-like protein.
    
 0.685
UCREL1_7678
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.685
UCREL1_10481
Putative transcription initiation factor tfiid subunit 12 protein.
   
 0.685
UCREL1_9485
Putative transcription initiation factor tfiid 127kd subunit protein.
   
 0.677
UCREL1_6089
Putative pre-rrna-processing protein ipi1 protein.
   
 0.675
UCREL1_2880
Putative zinc finger ccch type domain containing protein.
   
 0.671
UCREL1_1395
Putative anaphase-promoting complex subunit cut9 protein.
   
 0.669
UCREL1_8397
Putative anaphase-promoting complex component cut20 apc4 protein.
    
 0.658
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
Server load: low (22%) [HD]