STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_2394Putative trna (Guanine-n-)-methyltransferase protein. (309 aa)    
Predicted Functional Partners:
UCREL1_2392
Uncharacterized protein.
 
      0.817
UCREL1_9891
Putative rna polymerase rpb4 protein.
 
  
   0.602
UCREL1_7028
Putative replication protein a 32 kDa subunit protein.
    
 0.556
UCREL1_9892
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
 
      0.508
UCREL1_8056
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.494
UCREL1_8941
Putative dna repair protein.
    
 0.453
UCREL1_9504
Putative histone acetyltransferase type b subunit 2 protein.
    
 0.433
UCREL1_10970
Putative atp-dependent dna helicase mph1 protein.
    
 0.413
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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