UCREL1_2386 protein (Eutypa lata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UCREL1_2386

Putative aaa family protein. (1617 aa)

Predicted Functional Partners:

UCREL1_11214

0.841

UCREL1_9893

0.823

UCREL1_9235

0.811

UCREL1_10480

0.810

UCREL1_1896

0.809

UCREL1_934

0.806

UCREL1_7706

0.802

UCREL1_7076

0.790

UCREL1_6515

0.781

UCREL1_9369

0.768

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_10480	UCREL1_11214	M7S8Y7	M7SWA2	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	Putative 26s proteasome regulatory subunit rpn7 protein.	0.999
UCREL1_10480	UCREL1_1896	M7S8Y7	M7TWN5	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
UCREL1_10480	UCREL1_2386	M7S8Y7	M7TL04	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	Putative aaa family protein.	0.810
UCREL1_10480	UCREL1_6515	M7S8Y7	M7TIC2	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	Proteasome subunit alpha type.	0.998
UCREL1_10480	UCREL1_7076	M7S8Y7	M7SI00	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
UCREL1_10480	UCREL1_7706	M7S8Y7	M7SM82	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	Putative 26s proteasome regulatory subunit rpn9 protein.	0.999
UCREL1_10480	UCREL1_9235	M7S8Y7	M7SI34	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	Putative 26s proteasome non-atpase regulatory subunit 11 protein.	0.999
UCREL1_10480	UCREL1_9893	M7S8Y7	M7SG15	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	Putative 26s proteasome non-atpase regulatory subunit 4 protein.	0.999
UCREL1_11214	UCREL1_10480	M7SWA2	M7S8Y7	Putative 26s proteasome regulatory subunit rpn7 protein.	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	0.999
UCREL1_11214	UCREL1_1896	M7SWA2	M7TWN5	Putative 26s proteasome regulatory subunit rpn7 protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
UCREL1_11214	UCREL1_2386	M7SWA2	M7TL04	Putative 26s proteasome regulatory subunit rpn7 protein.	Putative aaa family protein.	0.841
UCREL1_11214	UCREL1_6515	M7SWA2	M7TIC2	Putative 26s proteasome regulatory subunit rpn7 protein.	Proteasome subunit alpha type.	0.999
UCREL1_11214	UCREL1_7076	M7SWA2	M7SI00	Putative 26s proteasome regulatory subunit rpn7 protein.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
UCREL1_11214	UCREL1_7706	M7SWA2	M7SM82	Putative 26s proteasome regulatory subunit rpn7 protein.	Putative 26s proteasome regulatory subunit rpn9 protein.	0.999
UCREL1_11214	UCREL1_9235	M7SWA2	M7SI34	Putative 26s proteasome regulatory subunit rpn7 protein.	Putative 26s proteasome non-atpase regulatory subunit 11 protein.	0.999
UCREL1_11214	UCREL1_9893	M7SWA2	M7SG15	Putative 26s proteasome regulatory subunit rpn7 protein.	Putative 26s proteasome non-atpase regulatory subunit 4 protein.	0.999
UCREL1_1896	UCREL1_10480	M7TWN5	M7S8Y7	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Putative 26s proteasome non-atpase regulatory subunit 3 protein.	0.999
UCREL1_1896	UCREL1_11214	M7TWN5	M7SWA2	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Putative 26s proteasome regulatory subunit rpn7 protein.	0.999
UCREL1_1896	UCREL1_2386	M7TWN5	M7TL04	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Putative aaa family protein.	0.809
UCREL1_1896	UCREL1_6515	M7TWN5	M7TIC2	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Proteasome subunit alpha type.	0.999