STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_1949Putative snf2 family helicase protein. (917 aa)    
Predicted Functional Partners:
UCREL1_4137
Putative dna repair protein rad18 protein.
   
 0.597
UCREL1_7639
Putative ubiquitin conjugating enzyme protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.581
UCREL1_4516
Putative ubiquitin-conjugating enzyme protein; Belongs to the complex I LYR family.
    
 0.570
UCREL1_7052
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.547
UCREL1_11033
Putative chromatin remodeling complex subunit protein; Belongs to the actin family.
    
 0.537
UCREL1_4689
Putative chromatin remodeling and histone acetyltransferase complexes subunit protein; Belongs to the actin family.
   
 0.530
UCREL1_1257
Putative proliferating cell nuclear antigen protein.
  
 0.500
UCREL1_1256
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.500
UCREL1_9247
Putative dna-directed rna polymerases i protein.
   
 0.485
UCREL1_11031
Putative yl1 nuclear protein.
    
 0.479
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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