STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_4477Putative serine threonine-protein phosphatase dullard protein. (318 aa)    
Predicted Functional Partners:
UCREL1_4839
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
 
  
   0.900
UCREL1_10222
Putative nuclear elongation and deformation protein 1 protein.
    
 0.848
UCREL1_9307
Putative transcription initiation factor iif subunit alpha protein.
    
 0.825
UCREL1_9891
Putative rna polymerase rpb4 protein.
    
 0.620
UCREL1_3339
Putative transcription initiation factor iif protein.
    
 0.610
UCREL1_3835
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
      
 0.583
UCREL1_223
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.582
UCREL1_9849
Putative dna-directed rna polymerases i and iii 40 kDa polypeptide protein.
    
 0.578
UCREL1_6509
Putative rna polymerase ii subunit 3 protein.
    
 0.578
UCREL1_7499
Uncharacterized protein.
    
 0.568
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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