STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_1252Putative poly-binding protein. (474 aa)    
Predicted Functional Partners:
UCREL1_7656
Nuclear cap-binding protein subunit 2.
    
 0.711
UCREL1_5576
Putative transformer-sr ribonucleo protein.
   
 0.656
UCREL1_1430
Putative dna-directed rna polymerases i ii iii subunit 10 protein.
   
  0.646
UCREL1_9247
Putative dna-directed rna polymerases i protein.
   
 
  0.643
UCREL1_7799
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.640
UCREL1_8824
Putative dna-directed rna polymerases ii 24 kDa polypeptide protein.
   
 
  0.637
UCREL1_4451
Putative metallothionein-i gene transcription activator protein.
   
  0.634
UCREL1_1205
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.628
UCREL1_9891
Putative rna polymerase rpb4 protein.
    
  0.625
UCREL1_6509
Putative rna polymerase ii subunit 3 protein.
   
 
  0.619
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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