UCREL1_4419 protein (Eutypa lata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UCREL1_4419

Putative metallo-beta-lactamase superfamily protein. (357 aa)

Predicted Functional Partners:

UCREL1_2769

0.900

UCREL1_6162

0.880

UCREL1_9695

0.779

UCREL1_7133

0.779

UCREL1_8312

0.750

UCREL1_2382

0.702

UCREL1_1906

0.699

UCREL1_1652

0.603

UCREL1_2380

0.511

UCREL1_11405

0.500

Your Current Organism:

Eutypa lata

NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UCREL1_11405	UCREL1_1652	M7SBX0	M7SXI0	Putative mitochondrial import receptor subunit tom-40 protein.	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	0.712
UCREL1_11405	UCREL1_1906	M7SBX0	M7TWM5	Putative mitochondrial import receptor subunit tom-40 protein.	Putative mitochondrial import inner membrane translocase subunit tim10 protein.	0.797
UCREL1_11405	UCREL1_2382	M7SBX0	M7T173	Putative mitochondrial import receptor subunit tom-40 protein.	Putative mitochondrial import inner membrane translocase subunit tim13 protein; Belongs to the small Tim family.	0.806
UCREL1_11405	UCREL1_4419	M7SBX0	M7TPD3	Putative mitochondrial import receptor subunit tom-40 protein.	Putative metallo-beta-lactamase superfamily protein.	0.500
UCREL1_11405	UCREL1_7133	M7SBX0	M7SNV2	Putative mitochondrial import receptor subunit tom-40 protein.	Sulfhydryl oxidase.	0.431
UCREL1_11405	UCREL1_8312	M7SBX0	M7SKN3	Putative mitochondrial import receptor subunit tom-40 protein.	Putative mitochondrial import inner membrane translocase subunit tim-9 protein.	0.726
UCREL1_11405	UCREL1_9695	M7SBX0	M7SGK1	Putative mitochondrial import receptor subunit tom-40 protein.	Sulfhydryl oxidase.	0.491
UCREL1_1652	UCREL1_11405	M7SXI0	M7SBX0	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	Putative mitochondrial import receptor subunit tom-40 protein.	0.712
UCREL1_1652	UCREL1_1906	M7SXI0	M7TWM5	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	Putative mitochondrial import inner membrane translocase subunit tim10 protein.	0.982
UCREL1_1652	UCREL1_2382	M7SXI0	M7T173	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	Putative mitochondrial import inner membrane translocase subunit tim13 protein; Belongs to the small Tim family.	0.998
UCREL1_1652	UCREL1_4419	M7SXI0	M7TPD3	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	Putative metallo-beta-lactamase superfamily protein.	0.603
UCREL1_1652	UCREL1_6162	M7SXI0	M7SQS9	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	Putative cox17 protein.	0.678
UCREL1_1652	UCREL1_7133	M7SXI0	M7SNV2	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	Sulfhydryl oxidase.	0.452
UCREL1_1652	UCREL1_8312	M7SXI0	M7SKN3	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	Putative mitochondrial import inner membrane translocase subunit tim-9 protein.	0.865
UCREL1_1652	UCREL1_9695	M7SXI0	M7SGK1	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	Sulfhydryl oxidase.	0.521
UCREL1_1906	UCREL1_11405	M7TWM5	M7SBX0	Putative mitochondrial import inner membrane translocase subunit tim10 protein.	Putative mitochondrial import receptor subunit tom-40 protein.	0.797
UCREL1_1906	UCREL1_1652	M7TWM5	M7SXI0	Putative mitochondrial import inner membrane translocase subunit tim10 protein.	Putative mitochondrial import inner membrane translocase subunit tim8 protein; Belongs to the small Tim family.	0.982
UCREL1_1906	UCREL1_2380	M7TWM5	M7T211	Putative mitochondrial import inner membrane translocase subunit tim10 protein.	Mitochondrial inner membrane protease ATP23; Has a dual role in the assembly of mitochondrial ATPase. Belongs to the peptidase M76 family.	0.610
UCREL1_1906	UCREL1_2382	M7TWM5	M7T173	Putative mitochondrial import inner membrane translocase subunit tim10 protein.	Putative mitochondrial import inner membrane translocase subunit tim13 protein; Belongs to the small Tim family.	0.992
UCREL1_1906	UCREL1_4419	M7TWM5	M7TPD3	Putative mitochondrial import inner membrane translocase subunit tim10 protein.	Putative metallo-beta-lactamase superfamily protein.	0.699