STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_742Putative 2-cyclic-nucleotide 3-phosphodiesterase protein. (204 aa)    
Predicted Functional Partners:
UCREL1_5551
Putative peptidyl-trna hydrolase protein.
  
  
 0.628
UCREL1_5593
tRNA ligase.
      
 0.615
UCREL1_685
Putative peptide chain release factor 1 protein.
  
  
 0.586
UCREL1_3290
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.531
UCREL1_7121
Putative arginyl-trna synthetase protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.522
UCREL1_3318
Putative arginyl-trna synthetase protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.522
UCREL1_6863
Putative 30s ribosomal protein s7 protein.
  
 
 0.516
UCREL1_2597
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
 0.516
UCREL1_11157
Putative 40s ribosomal protein s5 protein; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.516
UCREL1_8934
Putative phenylalanyl-trna beta subunit protein.
  
  
 0.513
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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