STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_2477Putative exopolygalacturonase protein. (411 aa)    
Predicted Functional Partners:
UCREL1_4457
Putative endopolygalacturonase protein.
  
  
0.916
UCREL1_9197
Putative d-galacturonic acid reductase protein.
     
  0.900
UCREL1_8804
Putative alpha-n-arabinofuranosidase a protein.
     
 0.813
UCREL1_5634
Putative alpha-l-arabinofuranosidase protein.
     
 0.813
UCREL1_5643
Putative glycoside hydrolase family 3 protein.
    
 0.808
UCREL1_4702
Putative glycoside hydrolase family 43 protein; Belongs to the glycosyl hydrolase 43 family.
     
 0.803
UCREL1_869
Putative 60s ribosomal protein l21 protein.
   
   0.560
UCREL1_3169
Putative 60s ribosomal protein l16 protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.516
UCREL1_8387
Putative 60s ribosomal protein l2 protein.
   
 
 0.504
UCREL1_5064
Putative mitochondrial 54s ribosomal protein rml2 protein.
   
 
 0.504
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.