STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UCREL1_1513Putative fad dependent oxidoreductase protein. (179 aa)    
Predicted Functional Partners:
UCREL1_3461
Putative nad-binding protein.
    
 
 0.682
UCREL1_9888
Putative 6-phosphogluconate dehydrogenase protein.
    
 
 0.682
UCREL1_6075
Putative phytoene synthase protein.
  
 
 0.596
UCREL1_524
Uncharacterized protein.
   
 0.544
UCREL1_1682
Putative squalene synthetase protein.
   
 
 0.510
UCREL1_11574
Histone H3; Belongs to the histone H3 family.
    
 0.508
UCREL1_6591
Putative grf zinc finger domain-containing protein.
    
 0.508
UCREL1_2639
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.506
UCREL1_9750
Putative histone deacetylase rpd3 protein.
   
 0.484
UCREL1_3404
Histone H2B; Belongs to the histone H2B family.
    
 0.484
Your Current Organism:
Eutypa lata
NCBI taxonomy Id: 1287681
Other names: E. lata UCREL1, Eutypa lata UCREL1
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