STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001879715_01974Unannotated protein. (136 aa)    
Predicted Functional Partners:
GCA_001879715_01975
Unannotated protein.
 
    
0.826
GCA_001879715_01977
Unannotated protein.
  
    0.722
GCA_001879715_01976
Unannotated protein.
  
    0.591
GCA_001879715_01978
Unannotated protein.
  
    0.516
GCA_001879715_01979
Unannotated protein.
  
    0.496
GCA_001879715_02017
Unannotated protein.
 
     0.487
GCA_001879715_01998
Unannotated protein.
  
     0.448
GCA_001879715_00013
Unannotated protein.
  
     0.433
GCA_001879715_03117
Unannotated protein.
  
   
 0.417
GCA_001879715_01923
Unannotated protein.
  
     0.403
Your Current Organism:
Nioella nitratireducens
NCBI taxonomy Id: 1287720
Other names: KCTC 32417, Marivita sp. SSW136, N. nitratireducens, NCIM 5499, Nioella nitratireducens Rajasabapathy et al. 2015, strain SSW136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.