STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK28034.1N-methylglutamate dehydrogenase subunit A precursor. (416 aa)    
Predicted Functional Partners:
SEK28154.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
 
 0.999
SEK28087.1
Sarcosine oxidase subunit delta.
 
  0.996
SEK95828.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.994
SEL06964.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.989
SEK28228.1
Sarcosine oxidase subunit gamma.
 
  0.956
SEK95869.1
Sarcosine oxidase subunit delta.
 
  0.952
SEK95781.1
Sarcosine oxidase subunit gamma.
 
  0.951
SEL07000.1
Sarcosine oxidase subunit delta.
 
 0.944
SEL06923.1
Sarcosine oxidase subunit gamma.
 
  0.910
SEK95914.1
Sarcosine oxidase subunit beta.
  
  
 
0.908
Your Current Organism:
Roseovarius azorensis
NCBI taxonomy Id: 1287727
Other names: DSM 100674, KCTC 32421, MTCC 11812, R. azorensis, Roseovarius azorensis Rajasabapathy et al. 2014, Roseovarius sp. SSW084, strain SSW084
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