Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK22106.1 | SEK49012.1 | SAMN05443999_10113 | SAMN05443999_101524 | Outer membrane protein. | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.803 |
SEK22106.1 | SEK86458.1 | SAMN05443999_10113 | SAMN05443999_102427 | Outer membrane protein. | Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump. | 0.963 |
SEK22106.1 | SEK97353.1 | SAMN05443999_10113 | SAMN05443999_10341 | Outer membrane protein. | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.967 |
SEK22106.1 | SEL70730.1 | SAMN05443999_10113 | SAMN05443999_107100 | Outer membrane protein. | Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.437 |
SEK22106.1 | SEL70766.1 | SAMN05443999_10113 | SAMN05443999_107101 | Outer membrane protein. | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.891 |
SEK22106.1 | SEL96872.1 | SAMN05443999_10113 | SAMN05443999_110104 | Outer membrane protein. | Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.827 |
SEK49012.1 | SEK22106.1 | SAMN05443999_101524 | SAMN05443999_10113 | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein. | 0.803 |
SEK49012.1 | SEL70766.1 | SAMN05443999_101524 | SAMN05443999_107101 | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.761 |
SEK49012.1 | SEM29876.1 | SAMN05443999_101524 | SAMN05443999_11913 | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein TolC. | 0.616 |
SEK86458.1 | SEK22106.1 | SAMN05443999_102427 | SAMN05443999_10113 | Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump. | Outer membrane protein. | 0.963 |
SEK86458.1 | SEK97353.1 | SAMN05443999_102427 | SAMN05443999_10341 | Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump. | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.907 |
SEK86458.1 | SEL70766.1 | SAMN05443999_102427 | SAMN05443999_107101 | Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump. | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.778 |
SEK86458.1 | SEM29876.1 | SAMN05443999_102427 | SAMN05443999_11913 | Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump. | Outer membrane protein TolC. | 0.679 |
SEK97353.1 | SEK22106.1 | SAMN05443999_10341 | SAMN05443999_10113 | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein. | 0.967 |
SEK97353.1 | SEK86458.1 | SAMN05443999_10341 | SAMN05443999_102427 | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hydrophobic/amphiphilic exporter-1, HAE1 family/multidrug efflux pump. | 0.907 |
SEK97353.1 | SEL70766.1 | SAMN05443999_10341 | SAMN05443999_107101 | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.787 |
SEK97353.1 | SEM29876.1 | SAMN05443999_10341 | SAMN05443999_11913 | Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein TolC. | 0.616 |
SEL70730.1 | SEK22106.1 | SAMN05443999_107100 | SAMN05443999_10113 | Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein. | 0.437 |
SEL70730.1 | SEL70766.1 | SAMN05443999_107100 | SAMN05443999_107101 | Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.965 |
SEL70730.1 | SEL70803.1 | SAMN05443999_107100 | SAMN05443999_107102 | Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Transcriptional regulator /transcriptional regulator, TetR family. | 0.887 |
page 1 of 3