STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL93570.1Phosphocarrier protein. (92 aa)    
Predicted Functional Partners:
SEL93610.1
PTS system, mannose-specific IIA component.
 
 
 0.999
SEK48581.1
Phosphotransferase system, enzyme I, PtsP; Belongs to the PEP-utilizing enzyme family.
  
 
 0.990
SEL29596.1
Transcriptional regulator, LacI family.
 
 
 
 0.941
SEL37687.1
Transcriptional regulator, LacI family.
 
 
 
 0.941
SEL55803.1
Transcriptional regulator, LacI family.
 
 
 
 0.940
SEL93687.1
Hpr(Ser) kinase/phosphatase.
 
 
 
 0.940
SEK82149.1
PTS IIA-like nitrogen-regulatory protein PtsN.
 
 
 0.904
SEL93652.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
  
  
 0.899
SEL93721.1
Two-component system, OmpR family, sensor histidine kinase ChvG.
       0.845
rpsG
SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
  
    0.843
Your Current Organism:
Roseovarius azorensis
NCBI taxonomy Id: 1287727
Other names: DSM 100674, KCTC 32421, MTCC 11812, R. azorensis, Roseovarius azorensis Rajasabapathy et al. 2014, Roseovarius sp. SSW084, strain SSW084
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