STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM29876.1Outer membrane protein TolC. (487 aa)    
Predicted Functional Partners:
SEM29804.1
Uncharacterized copper-binding protein, cupredoxin-like subfamily.
 
 
 0.958
SEM29840.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
   
 0.944
SEK86515.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.843
SEM30750.1
Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.839
SEL71078.1
HlyD family secretion protein.
  
 0.814
SEL71191.1
HlyD family secretion protein.
  
 0.814
SEL96839.1
RND family efflux transporter, MFP subunit.
  
 0.814
SEL96366.1
Hypothetical protein.
  
 0.814
SEK49069.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.804
SEK97293.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.804
Your Current Organism:
Roseovarius azorensis
NCBI taxonomy Id: 1287727
Other names: DSM 100674, KCTC 32421, MTCC 11812, R. azorensis, Roseovarius azorensis Rajasabapathy et al. 2014, Roseovarius sp. SSW084, strain SSW084
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.