Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM18788.1 | SEM33793.1 | SAMN05443999_1156 | SAMN05443999_12112 | Predicted transcriptional regulator. | Type I restriction enzyme, R subunit. | 0.704 |
SEM18788.1 | SEM33864.1 | SAMN05443999_1156 | SAMN05443999_12114 | Predicted transcriptional regulator. | Type I restriction enzyme, S subunit. | 0.695 |
SEM18788.1 | SEM33911.1 | SAMN05443999_1156 | SAMN05443999_12115 | Predicted transcriptional regulator. | Type I restriction enzyme M protein. | 0.507 |
SEM23208.1 | SEM33911.1 | SAMN05443999_11629 | SAMN05443999_12115 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | Type I restriction enzyme M protein. | 0.412 |
SEM27670.1 | SEM27721.1 | SAMN05443999_11820 | SAMN05443999_11821 | Hypothetical protein. | Hypothetical protein. | 0.772 |
SEM27670.1 | SEM33864.1 | SAMN05443999_11820 | SAMN05443999_12114 | Hypothetical protein. | Type I restriction enzyme, S subunit. | 0.872 |
SEM27670.1 | SEM33911.1 | SAMN05443999_11820 | SAMN05443999_12115 | Hypothetical protein. | Type I restriction enzyme M protein. | 0.677 |
SEM27721.1 | SEM27670.1 | SAMN05443999_11821 | SAMN05443999_11820 | Hypothetical protein. | Hypothetical protein. | 0.772 |
SEM27721.1 | SEM33864.1 | SAMN05443999_11821 | SAMN05443999_12114 | Hypothetical protein. | Type I restriction enzyme, S subunit. | 0.872 |
SEM27721.1 | SEM33911.1 | SAMN05443999_11821 | SAMN05443999_12115 | Hypothetical protein. | Type I restriction enzyme M protein. | 0.677 |
SEM33793.1 | SEM18788.1 | SAMN05443999_12112 | SAMN05443999_1156 | Type I restriction enzyme, R subunit. | Predicted transcriptional regulator. | 0.704 |
SEM33793.1 | SEM33832.1 | SAMN05443999_12112 | SAMN05443999_12113 | Type I restriction enzyme, R subunit. | Protein of unknown function. | 0.773 |
SEM33793.1 | SEM33864.1 | SAMN05443999_12112 | SAMN05443999_12114 | Type I restriction enzyme, R subunit. | Type I restriction enzyme, S subunit. | 0.995 |
SEM33793.1 | SEM33911.1 | SAMN05443999_12112 | SAMN05443999_12115 | Type I restriction enzyme, R subunit. | Type I restriction enzyme M protein. | 0.999 |
SEM33832.1 | SEM33793.1 | SAMN05443999_12113 | SAMN05443999_12112 | Protein of unknown function. | Type I restriction enzyme, R subunit. | 0.773 |
SEM33832.1 | SEM33864.1 | SAMN05443999_12113 | SAMN05443999_12114 | Protein of unknown function. | Type I restriction enzyme, S subunit. | 0.773 |
SEM33832.1 | SEM33911.1 | SAMN05443999_12113 | SAMN05443999_12115 | Protein of unknown function. | Type I restriction enzyme M protein. | 0.773 |
SEM33864.1 | SEM18788.1 | SAMN05443999_12114 | SAMN05443999_1156 | Type I restriction enzyme, S subunit. | Predicted transcriptional regulator. | 0.695 |
SEM33864.1 | SEM27670.1 | SAMN05443999_12114 | SAMN05443999_11820 | Type I restriction enzyme, S subunit. | Hypothetical protein. | 0.872 |
SEM33864.1 | SEM27721.1 | SAMN05443999_12114 | SAMN05443999_11821 | Type I restriction enzyme, S subunit. | Hypothetical protein. | 0.872 |
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