STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ26931.1PGAP1-like domain-containing protein. (507 aa)    
Predicted Functional Partners:
ALJ26621.1
UDP-glucose--lipooligosaccharide glucosyltransferase.
  
     0.730
ALJ29376.1
Membrane protein.
  
     0.626
ALJ26534.1
Serine/threonine protein phosphatase.
  
     0.595
ALJ26614.1
Fimbrial protein.
  
     0.572
ALJ27754.1
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC.
  
     0.557
ALJ26901.1
Hypothetical protein; Domain of unknown function (DUF4350).
  
     0.532
ALJ29834.1
PBS lyase.
  
     0.522
ALJ29627.1
Membrane protein.
  
     0.518
ALJ27494.1
Lipoprotein.
  
     0.487
ALJ28194.1
Transcriptional repressor protein.
  
     0.486
Your Current Organism:
Stenotrophomonas acidaminiphila
NCBI taxonomy Id: 128780
Other names: ATCC 700916, CCUG 46887, CIP 106456, DSM 13117, JCM 13310, S. acidaminiphila, Stenotrophomonas acidaminiphila Assih et al. 2002, strain AMX 19
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