STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ27324.1Aminotransferase/butyrosin synthesis protein. (353 aa)    
Predicted Functional Partners:
ALJ27933.1
Autotransporter beta-domain protein.
  
     0.667
ALJ26892.1
Trypsin protease.
  
     0.591
ALJ27323.1
Proline-rich protein.
       0.518
ALJ30035.1
Membrane protein.
  
     0.513
ALJ27514.1
Transmembrane Na+/H+ antiporter.
 
     0.499
ALJ29830.1
Fibronectin type III domain-containing protein.
  
     0.482
ALJ28835.1
Endoribonuclease L-PSP.
 
     0.479
ALJ27934.1
Fibronectin type III domain protein.
  
     0.470
ALJ26551.1
Transglutaminase.
  
     0.468
ALJ29995.1
Peptidase S46.
  
    0.429
Your Current Organism:
Stenotrophomonas acidaminiphila
NCBI taxonomy Id: 128780
Other names: ATCC 700916, CCUG 46887, CIP 106456, DSM 13117, JCM 13310, S. acidaminiphila, Stenotrophomonas acidaminiphila Assih et al. 2002, strain AMX 19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.