Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ29196.1 | gmk | AOT14_28400 | AOT14_28350 | Deoxyribonucleotide triphosphate pyrophosphatase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.573 |
ALJ29196.1 | guaA | AOT14_28400 | AOT14_21630 | Deoxyribonucleotide triphosphate pyrophosphatase. | GMP synthase. | 0.976 |
ALJ29196.1 | guaB | AOT14_28400 | AOT14_21640 | Deoxyribonucleotide triphosphate pyrophosphatase. | Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.942 |
ALJ29196.1 | pheT | AOT14_28400 | AOT14_14310 | Deoxyribonucleotide triphosphate pyrophosphatase. | phenylalanyl-tRNA synthetase subunit beta. | 0.407 |
apt | gmk | AOT14_17060 | AOT14_28350 | Adenine phosphoribosyltransferase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.967 |
apt | guaA | AOT14_17060 | AOT14_21630 | Adenine phosphoribosyltransferase. | GMP synthase. | 0.996 |
apt | guaB | AOT14_17060 | AOT14_21640 | Adenine phosphoribosyltransferase. | Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.654 |
apt | purL | AOT14_17060 | AOT14_30450 | Adenine phosphoribosyltransferase. | Phosphoribosylformylglycinamidine synthase. | 0.842 |
apt | pyrG | AOT14_17060 | AOT14_14560 | Adenine phosphoribosyltransferase. | CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. | 0.512 |
apt | upp | AOT14_17060 | AOT14_16800 | Adenine phosphoribosyltransferase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.458 |
argS | gmk | AOT14_05600 | AOT14_28350 | arginyl-tRNA synthetase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.551 |
argS | guaA | AOT14_05600 | AOT14_21630 | arginyl-tRNA synthetase. | GMP synthase. | 0.973 |
argS | lysS | AOT14_05600 | AOT14_20330 | arginyl-tRNA synthetase. | lysyl-tRNA synthetase. | 0.916 |
argS | pheT | AOT14_05600 | AOT14_14310 | arginyl-tRNA synthetase. | phenylalanyl-tRNA synthetase subunit beta. | 0.884 |
argS | purL | AOT14_05600 | AOT14_30450 | arginyl-tRNA synthetase. | Phosphoribosylformylglycinamidine synthase. | 0.663 |
argS | pyrG | AOT14_05600 | AOT14_14560 | arginyl-tRNA synthetase. | CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. | 0.893 |
gmk | ALJ29196.1 | AOT14_28350 | AOT14_28400 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Deoxyribonucleotide triphosphate pyrophosphatase. | 0.573 |
gmk | apt | AOT14_28350 | AOT14_17060 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Adenine phosphoribosyltransferase. | 0.967 |
gmk | argS | AOT14_28350 | AOT14_05600 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | arginyl-tRNA synthetase. | 0.551 |
gmk | guaA | AOT14_28350 | AOT14_21630 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | GMP synthase. | 0.971 |
page 1 of 4