STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ29532.1DUF932 domain-containing protein. (275 aa)    
Predicted Functional Partners:
ALJ28529.1
Chromosome partitioning protein ParB.
 
    0.753
ALJ28520.1
Uncharacterized conserved protein (DUF2285).
  
    0.701
ALJ28515.1
Regulator of plasmid copy number.
  
     0.662
ALJ28521.1
Lipoprotein.
  
    0.643
ALJ28514.1
Transposase.
  
     0.602
ALJ28512.1
Type VI secretion protein.
  
     0.568
ALJ29533.1
DUF3275 domain-containing protein.
       0.532
ALJ28525.1
y4eB protein.
  
     0.512
ALJ28513.1
Transmembrane anchor conjugal transfer protein.
  
     0.508
ALJ28488.1
CopG family transcriptional regulator.
  
     0.503
Your Current Organism:
Stenotrophomonas acidaminiphila
NCBI taxonomy Id: 128780
Other names: ATCC 700916, CCUG 46887, CIP 106456, DSM 13117, JCM 13310, S. acidaminiphila, Stenotrophomonas acidaminiphila Assih et al. 2002, strain AMX 19
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.