Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ALJ29550.1Integrating conjugative element protein. (77 aa)    
Predicted Functional Partners:
ALJ29549.1
Plasmid Ignore, RAQPRD family.
       0.816
ALJ29551.1
Integrating conjugative element membrane protein.
       0.779
ALJ29552.1
TIGR03750 family conjugative transfer region protein.
       0.762
ALJ29553.1
Integrating conjugative element protein.
       0.762
ALJ29554.1
Secreted protein.
       0.762
ALJ29555.1
Integrating conjugative element protein.
       0.762
ALJ29556.1
Conjugal transfer protein.
       0.762
ALJ29557.1
Conjugal transfer protein.
       0.762
ALJ29558.1
DSBA oxidoreductase.
       0.657
ALJ29548.1
Membrane protein.
       0.577
Your Current Organism:
Stenotrophomonas acidaminiphila
NCBI taxonomy Id: 128780
Other names: ATCC 700916, CCUG 46887, CIP 106456, DSM 13117, JCM 13310, S. acidaminiphila, Stenotrophomonas acidaminiphila Assih et al. 2002, strain AMX 19
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