STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ29716.1Two-component response regulator transcriptional regulator. (213 aa)    
Predicted Functional Partners:
ALJ28308.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.888
ALJ26748.1
Sensor histidine kinase/response regulator fusion protein.
  
 
 0.861
ALJ29673.1
Transmembrane sensor histidine kinase transcriptional regulator.
 
   0.846
ALJ28927.1
Two-component system sensor histidine kinase.
 
   0.845
ALJ29494.1
Sensor histidine kinase.
  
 
 0.838
ALJ30045.1
Two-component system sensor histidine kinase.
 
   0.836
ALJ26597.1
Histidine kinase.
 
   0.823
ALJ29715.1
Sensor histidine kinase/response regulator fusion protein.
   
   0.788
ALJ26596.1
LuxR family transcriptional regulator.
  
     0.774
ALJ28334.1
Two-component response regulator protein.
  
     0.741
Your Current Organism:
Stenotrophomonas acidaminiphila
NCBI taxonomy Id: 128780
Other names: ATCC 700916, CCUG 46887, CIP 106456, DSM 13117, JCM 13310, S. acidaminiphila, Stenotrophomonas acidaminiphila Assih et al. 2002, strain AMX 19
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