STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001556105_01988Unannotated protein. (264 aa)    
Predicted Functional Partners:
GCA_001556105_02550
Unannotated protein.
   
 
 0.875
GCA_001556105_01991
Unannotated protein.
     
 0.822
GCA_001556105_01987
Unannotated protein.
       0.762
GCA_001556105_00148
Unannotated protein.
  
     0.731
GCA_001556105_01990
Unannotated protein.
       0.707
GCA_001556105_01989
Unannotated protein.
       0.655
GCA_001556105_00122
Unannotated protein.
  
 
  0.646
GCA_001556105_00580
Unannotated protein.
  
     0.584
GCA_001556105_01060
Unannotated protein.
    
  0.570
GCA_001556105_02335
Unannotated protein.
 
 
   0.540
Your Current Organism:
Pseudoxanthomonas mexicana
NCBI taxonomy Id: 128785
Other names: ATCC 700993, CCUG 49454, CIP 106674, JCM 11524, NBRC 101034, P. mexicana, Pseudomonas sp. WO24, Pseudoxanthomonas mexicana Thierry et al. 2004, Pseudoxanthomonas sp. UR374_02, strain AMX 26B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.