STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H312_03248RPN1_RPN2_N domain-containing protein. (814 aa)    
Predicted Functional Partners:
H312_03273
PCI domain-containing protein.
   
 0.999
H312_03129
PCI domain-containing protein.
   
 0.999
H312_02164
MPN domain-containing protein.
   
 0.999
H312_01883
Uncharacterized protein.
   
 0.999
H312_01684
Uncharacterized protein.
   
 0.999
H312_01454
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.999
H312_01220
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
H312_00686
MPN domain-containing protein.
   
 0.999
H312_00378
PCI domain-containing protein.
   
 0.999
H312_00351
Proteasome subunit alpha type.
   
 0.999
Your Current Organism:
Anncaliia algerae
NCBI taxonomy Id: 1288291
Other names: A. algerae PRA339, Anncaliia algerae PRA-339, Anncaliia algerae PRA339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.