STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMP55946.1Sulfotransferase domain-containing protein; COG0457 FOG: TPR repeat. (267 aa)    
Predicted Functional Partners:
EMP55585.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
 
 0.841
EMP55947.1
Hypothetical protein.
 
     0.582
EMP55944.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.561
EMP55945.1
Capsular polysaccharide repeat unit transporter; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
     
 0.458
msrA-2
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.456
EMP55941.1
Hypothetical protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
  
 0.445
EMP55569.1
Hypothetical protein.
    
 0.405
EMP56056.1
N-acetylmuramoyl-l-alanine amidase II, murein hydrolase; COG0860 N-acetylmuramoyl-L-alanine amidase.
     
 0.402
EMP55959.1
TrkA domain-containing protein; COG0471 Di- and tricarboxylate transporters.
 
     0.401
Your Current Organism:
Marinobacter santoriniensis
NCBI taxonomy Id: 1288826
Other names: M. santoriniensis NKSG1, Marinobacter santoriniensis NKSG1, Marinobacter sp. NKSG1
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