STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ72140.1FAD dependent oxidoreductase; Function of strongly homologous gene; enzyme. (398 aa)    
Predicted Functional Partners:
CCQ72138.1
NAD(FAD)-dependent dehydrogenases; Function of strongly homologous gene; enzyme.
 
 
 0.985
thiG
Thiazole biosynthesis protein thiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 0.892
CCQ72137.1
Lactaldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
  
  
 0.800
gcvT
Glycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme.
  
 
 0.782
dapB
Dihydrodipicolinate reductase; Function of strongly homologous gene; enzyme; Belongs to the DapB family.
       0.773
CCQ72139.1
Protein of unknown function; No homology to any previously reported sequences.
       0.773
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.727
fccB
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain; Function of strongly homologous gene; enzyme.
  
 
 0.694
fccB-2
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain; Function of strongly homologous gene; enzyme.
  
 
 0.694
soxF
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain; Function of strongly homologous gene; enzyme.
  
 
 0.694
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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