STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hldDADP-L-glycero-D-mannoheptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. (328 aa)    
Predicted Functional Partners:
hldE
Bifunctional protein heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
 
 0.981
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
     
 0.822
CCQ72279.1
Homologs of previously reported genes of unknown function.
       0.820
CCQ72278.1
Homologs of previously reported genes of unknown function; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.814
CCQ73899.1
GT9 : distantly related to LPS heptosyl-2-transferase; Function of strongly homologous gene; transporter.
 
  
 0.791
CCQ72073.1
GT9 : distantly related to LPS heptosyltransferase II; Function of strongly homologous gene; enzyme.
 
  
 0.754
CCQ72223.1
GT9 : distantly related to LPS heptosyl-2-transferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.712
CCQ72277.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.684
CCQ72282.1
Homologs of previously reported genes of unknown function.
       0.668
rpsS
30S ribosomal subunit protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.650
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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