STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccpADi-haem cytochrome c peroxidase; Function of strongly homologous gene; enzyme. (398 aa)    
Predicted Functional Partners:
CCQ72466.1
Putative Electron transport protein SCO1/SenC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.994
CCQ72465.1
Putative Selenium-binding family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.960
CCQ73300.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
 
 0.714
fixP
Cytochrome-c oxidase fixP chain; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
  
 0.451
gfa
Glutathione-dependent formaldehyde-activating enzyme (S-(hydroxymethyl)glutathione synthase); Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family.
       0.450
hemN
Oxygen-independent coproporphyrinogen-III oxidase; Function of strongly homologous gene; enzyme; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
  
 0.427
tolB
Protein tolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
   0.417
CCQ74277.1
Homologs of previously reported genes of unknown function.
  
   0.417
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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