STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ72562.1Putative HTH-type transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (154 aa)    
Predicted Functional Partners:
recO
Putative DNA repair protein RecO (Recombination protein O); Involved in DNA repair and RecF pathway recombination.
  
    0.677
CCQ72734.1
Homologs of previously reported genes of unknown function.
  
     0.620
CCQ72561.1
Putative HTH-type transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
    
0.604
CCQ72733.1
Homologs of previously reported genes of unknown function.
  
     0.600
CCQ72527.1
Homologs of previously reported genes of unknown function.
  
     0.593
envZ
Osmolarity sensory histidine kinase; Function of strongly homologous gene; enzyme.
  
     0.589
CCQ74813.1
Putative SAM-dependent methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.584
CCQ74741.1
Homologs of previously reported genes of unknown function.
  
   
 0.568
CCQ75606.1
Putative DNA polymerase III subunit delta; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.558
CCQ74359.1
Conserved protein of unknown function containing DUF1013; Homologs of previously reported genes of unknown function.
  
     0.554
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.