STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ72828.1Putative Alcohol dehydrogenase 4; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (396 aa)    
Predicted Functional Partners:
CCQ72827.1
Conserved protein of unknown function,antibiotic biosynthesis monooxygenase domain; Homologs of previously reported genes of unknown function.
 
     0.943
frmA
S-(hydroxymethyl)glutathione dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.871
CCQ72830.1
Pyruvate-formate lyase-activating enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.793
glgA
GT5 : related to glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.624
glgA-2
GT5 : related to glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.624
glgA-3
GT5 : Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.624
CCQ73354.1
Conserved protein of unknown function. Containing cytochrome c5530 family protein domain; Homologs of previously reported genes of unknown function.
   
    0.595
CCQ72611.1
2-hydroxymuconate semialdehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
 
 
 0.558
gabD
Succinate-semialdehyde dehydrogenase [NADP+] (SSDH); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aldehyde dehydrogenase family.
 
 
 0.538
CCQ73248.1
Putative emzyme with 3-hydroxyacyl-CoA dehydrogenase and dodecenoyl-CoA isomerase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.533
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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