STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ72942.1Putative cell shape-determining protein MreD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (171 aa)    
Predicted Functional Partners:
mreC
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.996
mrdB
Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.933
mrdA
Peptidoglycan transpeptidase, penicillin binding protein MrdA; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.931
mreB
Cell shape-determining and plasmid segregation protein MreB; Function of homologous gene experimentally demonstrated in an other organism; structure.
 
  
 0.816
CCQ75337.1
Homologs of previously reported genes of unknown function.
  
     0.767
CCQ72294.1
Homologs of previously reported genes of unknown function.
  
     0.759
CCQ75136.1
Homologs of previously reported genes of unknown function.
  
   
 0.755
CCQ75602.1
Putative Outer membrane protein(Porin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component.
  
     0.753
CCQ75175.1
Homologs of previously reported genes of unknown function.
  
  
 0.745
CCQ75603.1
Homologs of previously reported genes of unknown function.
  
     0.730
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.