STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mamOMagnetosome protein MamO; Function of strongly homologous gene; cell process. (642 aa)    
Predicted Functional Partners:
mamP
Magnetosome protein MamP; Function of strongly homologous gene; cell process.
   
 
 0.942
mamK
Actin-like protein MamK; Function experimentally demonstrated in the studied genus; structure.
 
   
 0.870
mamH
Magnetosome protein MamH; Function of strongly homologous gene; cell process.
 
   
 0.857
mamQ
Magnetosome protein MamQ; Function of strongly homologous gene; cell process.
 
  
 0.844
mamE
Magnetosome protein MamE; Function of strongly homologous gene; cell process.
 
 
 
0.833
CCQ72791.1
Protein of unknown function, Trypsin-like serine proteases domain; No homology to any previously reported sequences.
  
 
 
 0.800
CCQ72265.1
Putative Trypsin-like serine proteases (contain C-terminal PDZ domain); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 
 0.799
mamN
Magnetosome protein MamN; Function of strongly homologous gene; cell process.
 
  
 0.787
mamM
Magnetosome protein MamM; Function of strongly homologous gene; cell process; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
   
 0.784
mamB
Magnetosome protein MamB; Plays a dual, essential role in magnetosome formation; required for magnetosome vesicle formation as well as biomineralization (By similarity). Probably binds and transports iron (Probable). Requires heterodimerization with MamM for stability (By similarity).
 
   
 0.773
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.