STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mamPMagnetosome protein MamP; Function of strongly homologous gene; cell process. (368 aa)    
Predicted Functional Partners:
mamO
Magnetosome protein MamO; Function of strongly homologous gene; cell process.
   
 
 0.942
mamQ
Magnetosome protein MamQ; Function of strongly homologous gene; cell process.
  
  
 0.711
mamB
Magnetosome protein MamB; Plays a dual, essential role in magnetosome formation; required for magnetosome vesicle formation as well as biomineralization (By similarity). Probably binds and transports iron (Probable). Requires heterodimerization with MamM for stability (By similarity).
     
 0.692
mamR
Magnetosome protein MamR; Function of strongly homologous gene; cell process.
     
 0.690
mamM
Magnetosome protein MamM; Function of strongly homologous gene; cell process; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.632
mamS
Magnetosome protein MamS; Function of strongly homologous gene; cell process.
     
 0.625
mamN
Magnetosome protein MamN; Function of strongly homologous gene; cell process.
     
 0.617
mamT
Magnetosome protein MamT; Function of strongly homologous gene; cell process.
     
 0.613
mamA
Magnetosome protein MamA; Function of strongly homologous gene; cell process.
       0.587
mamK
Actin-like protein MamK; Function experimentally demonstrated in the studied genus; structure.
     
 0.522
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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