STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ73406.1Putative phytoene synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (284 aa)    
Predicted Functional Partners:
CCQ73408.1
Putative squalene/phytoene synthase HpnD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
0.985
CCQ73407.1
Putative GT2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.968
CCQ73409.1
Putative HpnE: Squalene-associated FAD-dependent desaturase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.951
shc
Squalene--hopene cyclase; Function of strongly homologous gene; enzyme.
 
  
 0.869
CCQ72959.1
Putative SAM-dependent methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
    
 0.813
CCQ73405.1
Putative serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.776
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.752
nuoH
NADH-quinone oxidoreductase chain H (NADH dehydrogenase I, chain H) (NDH-1, chain H); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.730
CCQ73411.1
Putative hopanoid-associated phosphorylase HpnG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.700
CCQ75264.1
Putative Multidrug resistance protein NorM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
 
 0.683
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.