STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ73680.1Homologs of previously reported genes of unknown function. (140 aa)    
Predicted Functional Partners:
CCQ73842.1
O-acetylhomoserine (thiol)-lyase; Function of strongly homologous gene; enzyme.
      0.908
CCQ73681.1
Enoyl-CoA hydratase; Function of strongly homologous gene; enzyme.
 
     0.840
metZ
Cystathionine gamma-lyase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
      0.803
msrB
Peptide methionine sulfoxide reductase msrB; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the MsrB Met sulfoxide reductase family.
 
      0.713
CCQ73682.1
Putative Hemerythrin-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.697
CCQ75695.1
Conserved protein of unknown function[Include Glyoxalase domain]; Homologs of previously reported genes of unknown function.
      0.690
flgF
Flagellar basal-body rod protein FlgF; Function of strongly homologous gene; structure.
    
   0.512
zur
Zinc uptake regulation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the Fur family.
  
    0.508
fur
Ferric uptake regulation protein; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the Fur family.
  
    0.508
fur-2
Ferric uptake regulator family protein; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the Fur family.
  
    0.508
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.