STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ73841.1Homologs of previously reported genes of unknown function. (68 aa)    
Predicted Functional Partners:
CCQ73837.1
Putative high-affinity branched-chain amino acid transport system permease protein LivM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.723
CCQ73838.1
Putative high-affinity branched-chain amino acid transport system permease protein LivH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.723
livF
Leucine/isoleucine/valine transporter subunit; Function of strongly homologous gene; transporter.
       0.723
CCQ73840.1
Putative leucine/isoleucine/valine transporter subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
       0.723
CCQ73842.1
O-acetylhomoserine (thiol)-lyase; Function of strongly homologous gene; enzyme.
       0.508
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.