STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ73994.1Putative D-lactate ferricytochrome C oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (468 aa)    
Predicted Functional Partners:
CCQ73995.1
Conserved protein of unknown function. Containing Sua5/YciO/YrdC/YwlC domains; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.820
cysQ
3'(2'),5'-bisphosphate nucleotidase cysQ; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
       0.784
CCQ73997.1
Conserved protein of unknown function. Containing dioxygenase domain; Homologs of previously reported genes of unknown function; Belongs to the MEMO1 family.
       0.714
etfA
Electron transfer flavoprotein subunit alpha; Function of strongly homologous gene; carrier.
 
 
 0.598
glcF
Glycolate oxidase subunit, (Fe-S)protein, GlcF; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.
  
 0.581
etfB
Electron transfer flavoprotein subunit beta; Function of homologous gene experimentally demonstrated in an other organism; carrier.
 
 
 0.570
CCQ74541.1
Putative Fe-S oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.534
ubiA
Putative 4-hydroxybenzoate-octaprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
    
 0.531
gltB
Glutamate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.465
CCQ73998.1
Cold shock protein, DNA binding; Function of homologous gene experimentally demonstrated in an other organism; factor.
       0.416
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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