STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ74236.1Homologs of previously reported genes of unknown function. (62 aa)    
Predicted Functional Partners:
CCQ74235.1
Homologs of previously reported genes of unknown function.
  
    0.799
CCQ74234.1
Protein of unknown function; No homology to any previously reported sequences.
       0.773
CCQ74232.1
Protein of unknown function; No homology to any previously reported sequences.
  
    0.686
CCQ74233.1
Homologs of previously reported genes of unknown function.
       0.680
CCQ74231.1
Homologs of previously reported genes of unknown function.
       0.658
traG
Agrobacterium virulence virD4-like protein; Function of strongly homologous gene; factor.
       0.544
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.