STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ75555.1Homologs of previously reported genes of unknown function; Belongs to the BI1 family. (255 aa)    
Predicted Functional Partners:
CCQ75554.1
Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.622
CCQ75553.1
Putative ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.621
htpX
Membrane protease HtpX homolog; Function of strongly homologous gene; enzyme; Belongs to the peptidase M48B family.
  
  
 0.523
tesA
Multifunctional arylesterase:lysophospholipase protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.503
lysS
lysyl-tRNA synthetase (Lysine-tRNA ligase); Function of strongly homologous gene; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.449
CCQ75629.1
Tim44 domain-containing protein; Homologs of previously reported genes of unknown function.
  
  
 0.444
ligT
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.441
CCQ74069.1
Homologs of previously reported genes of unknown function.
   
    0.418
yidC
Membrane insertion protein yidC (oxaA); Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
     0.413
tas
Oxidoreductase, NADP(H)-dependent aldo-keto reductase; Function of strongly homologous gene; enzyme.
  
    0.413
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.