STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A966_08339Hypothetical protein. (506 aa)    
Predicted Functional Partners:
A966_03510
Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 
 0.913
A966_08344
COG2003 DNA repair proteins.
  
    0.491
A966_08349
COG1396 Predicted transcriptional regulators.
  
  
 0.491
A966_03955
Hypothetical protein; COG2205 Osmosensitive K+ channel histidine kinase.
  
  
 0.459
A966_08334
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.456
A966_09551
Hypothetical protein.
  
  
 0.422
A966_02441
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.418
Your Current Organism:
Brachyspira hampsonii
NCBI taxonomy Id: 1289135
Other names: B. hampsonii 30446, Brachyspira hampsonii 30446, Brachyspira hampsonii IDAC 16111-01, Brachyspira sp. 30446, Brachyspira sp. IDAC 16111-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.