STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMB99277.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (722 aa)    
Predicted Functional Partners:
AMC00027.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.503
AMB99296.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.459
AMB99295.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.458
AMB98651.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.453
AMB98652.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.451
AMB99276.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.446
AMB99794.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.446
AMB99795.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.441
AMB99278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.417
Your Current Organism:
Aerococcus urinaehominis
NCBI taxonomy Id: 128944
Other names: A. urinaehominis, Aerococcus urinae-hominis, Aerococcus urinaehominis Lawson et al. 2001 emend. Tohno et al. 2014, CCUG 42038 B, CCUG 42038b, CIP 106675, DSM 15634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.