STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMB99742.1Hypothetical protein; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase. (335 aa)    
Predicted Functional Partners:
AMB99743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.995
citD
Citrate lyase ACP; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.916
citD-2
Citrate lyase ACP; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.916
AMB98715.1
[citrate [pro-3S]-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
  
  
 
0.912
AMB99734.1
Citrate lyase subunit beta; citryl-ACP lyase; catalyzes the formation of acetate and oxaloacetate from citrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.902
AMB98711.1
Citrate lyase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.897
AMB98712.1
Citrate lyase subunit beta; citryl-ACP lyase; catalyzes the formation of acetate and oxaloacetate from citrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.897
AMB99735.1
Citrate lyase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.897
AMB99744.1
Converts oxaloacetate to phosphoenolpyruvate using ATP as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
AMB99736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.743
Your Current Organism:
Aerococcus urinaehominis
NCBI taxonomy Id: 128944
Other names: A. urinaehominis, Aerococcus urinae-hominis, Aerococcus urinaehominis Lawson et al. 2001 emend. Tohno et al. 2014, CCUG 42038 B, CCUG 42038b, CIP 106675, DSM 15634
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