STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001939785_00353Unannotated protein. (441 aa)    
Predicted Functional Partners:
GCA_001939785_01179
Unannotated protein.
 
  
  0.891
GCA_001939785_01180
Unannotated protein.
 
 
  0.889
GCA_001939785_00352
Unannotated protein.
 
     0.868
GCA_001939785_01182
Unannotated protein.
 
   
 0.736
GCA_001939785_01177
Unannotated protein.
 
     0.729
GCA_001939785_00620
Unannotated protein.
  
 
 0.701
GCA_001939785_00560
Unannotated protein.
  
  
 0.694
GCA_001939785_01181
Unannotated protein.
 
     0.694
GCA_001939785_00180
Unannotated protein.
    
 0.641
GCA_001939785_01178
Unannotated protein.
 
     0.515
Your Current Organism:
Pseudochrobactrum sp. B5
NCBI taxonomy Id: 1289478
Other names: P. sp. B5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.