STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BcDW1_7350Putative translation elongation factor eef-1b gamma protein; Belongs to the GST superfamily. (224 aa)    
Predicted Functional Partners:
BcDW1_10447
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.999
BcDW1_2264
Putative elongation factor 1-beta protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.999
BcDW1_4435
Putative elongation factor 3 protein.
   
 
 0.996
BcDW1_3028
Putative elongation factor 3 protein.
   
 
 0.994
BcDW1_3407
Putative elongation factor 2 protein.
   
 
 0.983
BcDW1_1428
Putative 40s ribosomal protein s2 protein; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.980
BcDW1_7290
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.977
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.975
BcDW1_6549
Putative elongation factor 1 gamma domain-containing protein.
  
0.972
BcDW1_1353
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 
 0.969
Your Current Organism:
Botrytis cinerea BcDW1
NCBI taxonomy Id: 1290391
Other names: B. cinerea BcDW1, Botryotinia fuckeliana BcDW1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.