STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000812685_02499Unannotated protein. (146 aa)    
Predicted Functional Partners:
GCA_000812685_02498
Unannotated protein.
       0.774
GCA_000812685_03389
Unannotated protein.
  
     0.572
GCA_000812685_00348
Unannotated protein.
  
     0.502
GCA_000812685_02500
Unannotated protein.
       0.478
GCA_000812685_02501
Unannotated protein.
       0.462
GCA_000812685_00696
Unannotated protein.
  
     0.452
GCA_000812685_00140
Unannotated protein.
  
     0.449
GCA_000812685_03079
Unannotated protein.
    
 0.442
GCA_000812685_01970
Unannotated protein.
  
     0.438
GCA_000812685_02942
Unannotated protein.
  
     0.437
Your Current Organism:
Halocynthiibacter namhaensis
NCBI taxonomy Id: 1290553
Other names: H. namhaensis, Halocynthiibacter namhaensis Kim et al. 2014, KCTC 32362, NBRC 109999, Rhodobacteraceae bacterium RA2-3, strain RA2-3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.