STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000812685_02783Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000812685_02782
Unannotated protein.
 
 
 0.991
GCA_000812685_02781
Unannotated protein.
 
 
  0.990
GCA_000812685_02784
Unannotated protein.
 
     0.864
GCA_000812685_02780
Unannotated protein.
 
     0.862
GCA_000812685_02779
Unannotated protein.
 
     0.843
GCA_000812685_02785
Unannotated protein.
 
     0.826
GCA_000812685_02786
Unannotated protein.
 
    0.782
GCA_000812685_01908
Unannotated protein.
  
 
 0.700
GCA_000812685_00439
Unannotated protein.
   
 
 0.641
GCA_000812685_01098
Unannotated protein.
   
 
 0.641
Your Current Organism:
Halocynthiibacter namhaensis
NCBI taxonomy Id: 1290553
Other names: H. namhaensis, Halocynthiibacter namhaensis Kim et al. 2014, KCTC 32362, NBRC 109999, Rhodobacteraceae bacterium RA2-3, strain RA2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.