STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000812685_03258Unannotated protein. (367 aa)    
Predicted Functional Partners:
GCA_000812685_03259
Unannotated protein.
  
 0.951
GCA_000812685_00616
Unannotated protein.
    
  0.803
GCA_000812685_03260
Unannotated protein.
       0.778
GCA_000812685_03261
Unannotated protein.
       0.670
GCA_000812685_01997
Unannotated protein.
  
     0.547
GCA_000812685_00851
Unannotated protein.
     
 0.513
GCA_000812685_02333
Unannotated protein.
    
  0.478
GCA_000812685_01439
Unannotated protein.
    
  0.452
GCA_000812685_00351
Unannotated protein.
 
    0.432
GCA_000812685_01325
Unannotated protein.
 
     0.417
Your Current Organism:
Halocynthiibacter namhaensis
NCBI taxonomy Id: 1290553
Other names: H. namhaensis, Halocynthiibacter namhaensis Kim et al. 2014, KCTC 32362, NBRC 109999, Rhodobacteraceae bacterium RA2-3, strain RA2-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.