STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM56300.1Amino acid ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (321 aa)    
Predicted Functional Partners:
KRM56298.1
Branched-chain amino acid ABC transporter ATPase.
 
 0.999
KRM56299.1
ABC-type branched-chain amino acid transport system, ATPase component.
 
 0.999
KRM56301.1
Branched-chain amino acid abc transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
KRM56302.1
livA protein.
 
 
 0.999
KRM54817.1
Major tail protein.
   
   0.941
KRM54549.1
ABC-type polar amino acid transport system, ATPase component.
 
    
 0.905
KRM55964.1
ABC-type polar amino acid transport system, ATPase component.
 
    
 0.905
KRM55340.1
ABC-type polar amino acid transport system, ATPase component.
 
    
 0.905
KRM55801.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
    
 0.904
potA
ABC-type spermidine putrescine transport system, ATPase component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
    0.899
Your Current Organism:
Lactobacillus sharpeae
NCBI taxonomy Id: 1291052
Other names: L. sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae DSM 20505, Lactobacillus sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae LMG 9214, Lactobacillus sharpeae NCIB 11720
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.