STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM56304.1Diguanylate cyclase phosphodiesterase domain-containing protein. (378 aa)    
Predicted Functional Partners:
KRM55376.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
    0.802
KRM54415.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
    0.786
KRM56168.1
Diguanylate cyclase phosphodiesterase domain-containing protein.
    0.742
KRM55269.1
Signal transduction diguanylate cyclase.
 
    0.729
KRM55253.1
C-di-GMP-specific phosphodiesterase.
 
    0.713
KRM56294.1
C-di-GMP-specific phosphodiesterase.
 
    0.690
KRM55977.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.689
KRM54917.1
C-di-GMP-specific phosphodiesterase.
 
    0.669
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.655
KRM54533.1
C-di-GMP-specific phosphodiesterase.
 
    0.636
Your Current Organism:
Lactobacillus sharpeae
NCBI taxonomy Id: 1291052
Other names: L. sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae DSM 20505, Lactobacillus sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae LMG 9214, Lactobacillus sharpeae NCIB 11720
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